RCN Workshop: Abalone1 solution

RCN Marine Disease Modeling and Transmission Workshop

May 11-15, 2015

Center for Coastal Physical Oceanography
Old Dominion University
Norfolk, Virginia 23529

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Example solution for single species single population model (abalone1)

This example activates all infection mechanisms but at different rates. The simulation begins with 100 susceptible animals and one infected animal. The simulation runs for 100 days.
model parameters:
PAR.IPinfect 0.003
PAR.Iinfect 0.001
PAR.Dinfect 0.0008
PAR.Imort 8.d-2
PAR.Bmort 0
PAR.DeadDecay 1.5
PAR.Irelease .015
PAR.Drelease 1.0
PAR.IPremove 0.001
As a diagnostic, the infection rate for the three different processes are calculated from the model solution. The lines represent the particle infection rate (solid line), the infected contact infection rate (dashed line) and the dead infected contact infection rate (dot-dashed line). [Ab1InfRate.png]